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Primary Analysis: From Sample to Wig file in 8 Easy Steps

Werner Van Belle1* - werner@yellowcouch.org, werner.van.belle@gmail.com

1- Deep Sequencing Unit Department of Biosystems Science and Engineering ETH Zurich; Mattenstrasse 24, Building 1058, Basel; Switzerland

Abstract :  This presentation explains how data processing is performed in the Illumina pipeline. It also extends on two necessary tools: Eland2Exp and Eland2Wig

Keywords:  deep sequencing, sequencing by synthesis
Reference:  Werner Van Belle; Primary Analysis: From Sample to Wig file in 8 Easy Steps; Presented at 1st workshop on high throughput sequencing; Switzerland; October 2008
FilesDeepSequencing.avi, alignment2profile.avi
See also:
The research article.
The browsable correlation maps between Histone Methylation and Acetylation tracks
Some posters [1, 2, 3]
Presentations of this research at FMI, Novartis, UNIL, University Zürich and ETH Zürich [1, 2]